Output format guide — goal → capability

Pick the output by what you're building, expressed as a capability. The current names of the formats and the options that modify them come from the installed --help (SKILL.md "Source-of-truth rule") — this guide never spells them, because they change between releases. Match your goal to a capability here, then find the option that provides it in the installed help.

Scope note: producing a structure-tagged PDF as an extraction output is a format capability; it is not PDF/UA accessibility-compliance certification, which is out of scope for this tool (SKILL.md frontmatter / "Purpose").

Goal → capability

Your goal	Capability you need	How to find it
RAG with source citation (page + region)	a structured format that carries per-element position metadata (page number, bounding box)	find the structured/data output format in `--help`; confirm it carries position by probing one output (`integration-examples.md`)
RAG text chunking on structure	a format whose structure maps to chunk boundaries (headings/sections)	the rich-text / markup output format
Plain-text search, smallest output	a plain-text format, no markup	the text output format
Web display	a browser-renderable markup format	the HTML-family output format
Quality / detection debugging	an annotated output (boxes over a copy of the input) plus the structured data to correlate	the annotated-PDF output + the structured format together (`eval-metrics.md`)
Docs with images	a markup format plus an image-handling capability (self-contained vs. referenced)	the markup format + the image-output option; see the size/portability trade in `option-interactions.md` §B.8
Complex-table fidelity in markup	a markup format that can fall back to richer table markup where plain syntax loses structure	the markup format + its rich-table modifier
Framework loader (LangChain / LlamaIndex)	the loader's own format parameter	the loader package's docs; verify its default there (`integration-examples.md`)

Capabilities are not all values of one format option

A durable distinction that survives renames: the choice of output file kind is one thing; modifiers that change how a kind is rendered are usually separate options. Image handling (inlined / external / dropped), rich-table-in-markup, and per-page separators are typically their own options, not values of the format selector — and some values that once lived on the format selector migrate to dedicated options over releases (old spellings may linger as deprecated aliases that emit a warning). Read the current --help to see which capability is a format value and which is a separate option; don't assume a value you remember is still one.

Producing several formats at once

The tool can usually emit multiple output kinds in a single pass — parsing the PDF once and keeping the outputs consistent. Find the multi-value form in --help. But see the streaming hazard next.

Streaming to stdout — a hazard, not just a convenience

Streaming output to stdout is handy for piping, but two silent traps apply (SKILL.md "Silent-failure hazards"; option-interactions.md §A.3):

Some output kinds (typically the structured / markup-heavy ones) never stream — you get empty stdout on a zero exit. Write those to a file and read the file.
A stdout stream carries at most one text-like kind; request several and the rest are silently dropped.

Also suppress the tool's own log lines (find the quiet option in --help) so they don't pollute the stream, and VERIFY the pipe actually carried non-empty, parseable content.

Cross-references: SKILL.md "Representative workflow", "VERIFY", "Silent-failure hazards"; option-interactions.md (§B.8 image size trade, §A.3 stdout trap); integration-examples.md (citation-carrying RAG handoff); eval-metrics.md (annotated-output debugging).