docs/source/user_guide/troubleshooting.rst
.. _troubleshooting:
Please make sure that you use the :ref:official Mambaforge installer <mamba-install> to install Mamba.
Other installation methods are not supported.
base environmentInstalling Mamba to an environment other than base is not supported. Mamba must be installed in the base environment alongside Conda, and no other packages may be installed into base.
.. _base_packages:
baseInstalling packages other than Conda and Mamba into the base environment is not supported. Mamba must live in the same environment as Conda, and Conda does not support having packages other than Conda itself and its dependencies in base.
.. _defaults_channels:
defaults channelsIt is not recommended to use the
Anaconda default channels <https://docs.anaconda.com/free/anaconda/reference/default-repositories/>_:
pkgs/mainpkgs/r / Rmsys2defaults (which includes all of the above)Please note that we won't be able to help resolving any problems you might face with the Anaconda channels.
To check if you have any Anaconda default channels in your configuration, use::
$ mamba info
...
channel URLs : https://repo.anaconda.com/pkgs/... # BAD!
...
https://conda.anaconda.org/conda-forge/...
...
Please change your configuration to use only conda-forge using one of the following methods.
Disable the default channels in your install commands::
mamba install --override-channels ...
Or your :file:environment.yml file:
.. code-block:: yaml
name: ... channels: - ... - nodefaults
Or in your :file:~/.condarc file:
.. code-block:: yaml
... channels: - ... - defaults # BAD! Remove this if it exists. - nodefaults
Mixing the defaults and conda-forge channels
The `Anaconda default channels <https://docs.anaconda.com/free/anaconda/reference/default-repositories/>`_
are **incompatible** with conda-forge.
Using the default and ``conda-forge`` channels at the same time is not supported and will lead to broken environments:
.. code-block:: yaml
# NOT supported!
channels:
- conda-forge
- defaults
Mamba broken after Conda update
-------------------------------
Mamba sometimes stops working if you update to a very recent version of Conda.
Please downgrade to the latest working a version and file a bug report in the Mamba bug tracker
if the problem has not been reported yet.
Mamba or Micromamba broken after an update
------------------------------------------
While we make our best effort to keep backward compatibility, it is not impossible that an update
breaks the current installation.
The following actions can be tried:
- Reinitializing your shell with ``micromamba shell reinit``.
- Deleting the package cache (``"package cache"`` entries in ``micromamba info``)
libmamba.so.2: undefined symbol ...
-----------------------------------
See :ref:`defaults_channels`.
Windows long paths
------------------
Windows API historically supports paths up to 260 characters. While it's now possible to used longer ones, there are still limitations related to that.
``libmamba`` internally relies on ``\\?\`` prefixing to handle such paths. If you get error messages advertising such prefix, please have look at the following steps:
Long paths support has to be activated
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
source: Robocop `troubleshooting documentation <https://sema4.ai/docs/automation/troubleshooting/windows-long-path>`_
1. Open the Local Group Policy Editor application: - Start --> type gpedit.msc --> Enter:
2. Navigate to Computer Configuration > Administrative Templates > System > Filesystem. On the right, find the "Enable win32 long paths" item and double-click it
3. Change the setting to Enabled
4. Exit the Local Group Policy Editor and restart your computer (or sign out and back in) to allow the changes to finish
If the problem persists after those steps, try the following:
1. Open the Registry Editor application: - Start --> type regedit.msc and press Enter:
2. Navigate to HKEY-LOCAL-MACHINE > SYSTEM > CurrentControlSet > Control > FileSystem. On the right, find the LongPathsEnabled item and double-click it
3. Change the Value data: to 1
4. Exit the Registry Editor
cmd.exe does not support calls to long prefixes
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
While ``cmd.exe`` shell support long paths prefixing for directory operations such as ``dir``, it doesn't allow to call an executable or a batch file located at a long path prefix.
Thus, the following cases will fail:
- completely
- calling executables located at long prefixes
- installation of packages with pre/post linking or activation ``.bat`` scripts
- partially
- pre-compilation of ``noarch`` packages, with no impact on capability to use the package but removing it will let artifacts (pycache) on the filesystem
Hangs during install in QEMU
----------------------------
When using Mamba/Micromamba inside a QEMU guest, installing packages may sometimes hang forever due to an `issue with QEMU and glibc <https://gitlab.com/qemu-project/qemu/-/issues/285>`_. As a workaround, set ``G_SLICE=always-malloc`` in the QEMU guest, eg.::
export G_SLICE=always-malloc
mamba install ...
See `#1611 <https://github.com/mamba-org/mamba/issues/1611>`_ for discussion.
Hangs during package installation on NFS (Network File Systems)
---------------------------------------------------------------
When using Mamba/Micromamba in a environment with NFS, package installation (e.g., NumPy) may hang at the step when ``libmamba`` attempts to lock a directory.
A solution is to update the Mamba/Micromamba configuration to not use lockfile by the command::
micromamba config set use_lockfiles False
See `#2592 <https://github.com/mamba-org/mamba/issues/2592>`_, `#1446 <https://github.com/mamba-org/mamba/issues/1446>`_, `#1448 <https://github.com/mamba-org/mamba/pull/1448>`_, `#1515 <https://github.com/mamba-org/mamba/issues/1515>`_ for more details.
"libmamba Download error (7) Could not connect to server"
---------------------------------------------------------
``mamba install`` and other ``mamba`` commands yield said errors. This might be due to being flagged by an antivirus.
A solution is to whitelist the appropriate folders and files; see `#3979 <https://github.com/mamba-org/mamba/issues/3979>`_ for more details.