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GitNexus CLI Commands

gitnexus-claude-plugin/skills/gitnexus-cli/SKILL.md

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GitNexus CLI Commands

All commands work via npx — no global install required.

Commands

analyze — Build or refresh the index

bash
npx gitnexus analyze

Run from the project root. This parses all source files, builds the knowledge graph, writes it to .gitnexus/, and generates CLAUDE.md / AGENTS.md context files.

FlagEffect
--forceForce full re-index even if up to date
--embeddingsEnable embedding generation for semantic search (off by default)
--drop-embeddingsDrop existing embeddings on rebuild. By default, an analyze without --embeddings preserves them.

When to run: First time in a project, after major code changes, or when gitnexus://repo/{name}/context reports the index is stale.

status — Check index freshness

bash
npx gitnexus status

Shows whether the current repo has a GitNexus index, when it was last updated, and symbol/relationship counts. Use this to check if re-indexing is needed.

clean — Delete the index

bash
npx gitnexus clean

Deletes the .gitnexus/ directory and unregisters the repo from the global registry. Use before re-indexing if the index is corrupt or after removing GitNexus from a project.

FlagEffect
--forceSkip confirmation prompt
--allClean all indexed repos, not just the current one

wiki — Generate documentation from the graph

bash
npx gitnexus wiki

Generates repository documentation from the knowledge graph using an LLM. Requires an API key (saved to ~/.gitnexus/config.json on first use).

FlagEffect
--forceForce full regeneration
--model <model>LLM model (default: minimax/minimax-m2.5)
--base-url <url>LLM API base URL
--api-key <key>LLM API key
--concurrency <n>Parallel LLM calls (default: 3)
--gistPublish wiki as a public GitHub Gist

list — Show all indexed repos

bash
npx gitnexus list

Lists all repositories registered in ~/.gitnexus/registry.json. The MCP list_repos tool provides the same information.

After Indexing

  1. Read gitnexus://repo/{name}/context to verify the index loaded
  2. Use the other GitNexus skills (exploring, debugging, impact-analysis, refactoring) for your task

Troubleshooting

  • "Not inside a git repository": Run from a directory inside a git repo
  • Index is stale after re-analyzing: Restart Claude Code to reload the MCP server
  • Embeddings slow: Omit --embeddings (it's off by default) or set OPENAI_API_KEY for faster API-based embedding