docs/RECOVERY.md
Last reviewed: 2026-06-09
Freshness source: cmd/bd/init.go, cmd/bd/init_safety.go,
cmd/bd/init_safety_test.go, and cmd/bd/dolt.go.
This document lives next to the ADRs and matches the structure of bd's
error messages: each named refusal in bd init and bd dolt push/pull
points here to a labeled anchor with step-by-step recovery instructions.
See also: bd help init-safety, and
ADR 0002 — bd init safety invariants.
bd init --force/--reinit-local refused because origin has Dolt history--discard-remote refused because --destroy-token is missing or wrongbd init refused because local data already existsbd dolt pull/push refused because a table has different primary keys in its common ancestorExit code: 10 (ExitRemoteDivergenceRefused)
Symptom
bd init refuses: remote 'origin' already has Dolt history (refs/dolt/data).
Why: this init mode would create or reuse local history instead of
adopting the remote. ...
Why this happens
bd init --force (or --reinit-local) tells bd to bypass the local
data-safety guard. bd init --from-jsonl selects a local JSONL export as
the source. But the remote already has project history. Proceeding would
create an orphan local Dolt branch with no common ancestor on origin. The
next bd dolt push would either fail (no common ancestor) or — worse, if
force-pushed — destroy the team's data.
Recovery paths
Pick the one that matches your intent.
bd bootstrap
This clones the remote's Dolt database into a fresh local .beads/.
Your local state is ignored; the team's history becomes yours.
bd doctor
bd dolt status
bd doctor walks the local + remote state and names concrete problems.
bd dolt status shows the Dolt-level view. Neither modifies anything.
This is a cross-boundary operation that affects every collaborator. You
need to pair the local-source init (--reinit-local or --from-jsonl)
with --discard-remote. In interactive mode bd will prompt for
confirmation; in non-interactive mode you must supply a --destroy-token.
See bd help init-safety for the token format.
After bd init --reinit-local --discard-remote, your next
bd dolt push must be a history-replacing push. Coordinate with your
team before doing this.
Exit code: 12 (ExitDestroyTokenMissing)
Symptom
bd init refuses: --discard-remote requires an explicit destroy-token in non-interactive mode.
Why this happens
You're running non-interactively (CI, agent, piped input) and passed
--discard-remote. Destructive cross-boundary operations cannot be
authorized silently.
Recovery paths
Re-run in a TTY. bd init --reinit-local --discard-remote will prompt
you to type the destroy-token at confirmation time.
The token format is DESTROY-<issue-prefix>. For a project whose issue
prefix is bd:
bd init --reinit-local --discard-remote --destroy-token=DESTROY-bd
Automation should template the token from project state, not from error
output. See ADR 0002 — Invariant 4
for why the token is never echoed in bd's error messages.
Exit code: 11 (ExitLocalExistsRefused)
Symptom
Refusing to destroy N issues in non-interactive mode.
See 'bd help init-safety' for the required --destroy-token format.
Or, in interactive mode, you declined the typed destroy N issues
confirmation.
Why this happens
Local .beads/ has existing issues. bd init --reinit-local would
permanently destroy them.
Recovery paths
bd export > issue-export.jsonl
bd init --reinit-local
issue-export.jsonl lets you re-import individual issues if needed. It is not
a full database backup; use bd backup when the Dolt database is healthy
enough to create a restorable backup before reinitializing.
If you did NOT expect bd init to be the right command here, run
bd doctor first — you may be looking at a server config issue that a
re-init won't fix.
Symptom
$ bd dolt pull
Error: ... cannot merge because table dependencies has different primary keys in its common ancestor
(or the variant without in its common ancestor). bd follows the error
with a short version of the recovery recipe below.
Why this happens
The two histories being merged disagree about a table's primary key set —
not about row contents. Dolt can cell-merge rows, but it refuses outright to
merge a table whose primary key was reshaped differently on each side (or
whose common ancestor had a different primary key than both sides). The
refusal happens before any row conflicts materialize, so bd dolt pull's
conflict auto-resolver never gets a chance to run. Retrying never helps:
the histories are permanently un-mergeable.
The usual cause is upgrading bd independently on two clones while un-synced
changes existed on both sides, across a release whose schema migrations
reshape a primary key. Concretely: the
#4259 incident — clones
straddling the 0041/0043/0050 reshapes of dependencies (v1.0.4 →
v1.0.6) hit exactly this on the first post-upgrade pull if both sides had
unpushed dependency edits.
The remote-migrate prevention gate (v1.0.6+) exists to stop this from being created: it refuses to auto-migrate a remote-backed database and tells you to designate a single migrator. This playbook is for when the fork already exists.
Recovery: bootstrap from one canonical clone
The forked histories cannot be merged, so one side must be chosen as canonical and every other clone re-cloned from it. Issue data survives via JSONL export/import; only the un-mergeable Dolt history is discarded on the non-canonical clones.
Usually the most complete / most recently active clone. To compare, run on each clone (read-only):
bd stats
bd dolt status
bd version # confirm the new bd binary
bd doctor # sanity-check before publishing
bd dolt push --force # make the remote authoritative
(bd's migration gate may ask for BD_ALLOW_REMOTE_MIGRATE=1 — on the
canonical clone, that is exactly the designated-migrator case the gate is
asking about.)
bd export --all -o /tmp/beads-local.jsonl # safety net for un-synced work
rm -rf .beads/dolt # discard the un-mergeable history
bd bootstrap # re-clone from the remote
bd import /tmp/beads-local.jsonl # re-apply local-only work
bd import has upsert semantics: issues that only existed on this clone are
re-created, newer local edits are applied, and rows older than what the
remote already has are skipped. Spot-check with bd stats afterwards.
bd dolt push + bd dolt pull on every clone
while all clones still run the old version, then stop editing. Once the new
binary is installed, bd dolt push/bd dolt pull are gated too, so this must
happen first.bd dolt push.bd bootstrap to adopt the migrated
database. bd dolt pull is refused while the clone still has pending
migrations, so do not rely on it; the "sync before" step above is what
preserves these clones' work, because bd bootstrap replaces the local
database.