docs/source/python/integration/substrait.rst
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The arrow-substrait module implements support for the Substrait_ format,
enabling conversion to and from Arrow objects.
The arrow-dataset module can execute Substrait_ plans via the
:doc:Acero <../../cpp/acero> query engine.
.. contents::
Arrow schemas can be encoded and decoded using the :meth:pyarrow.substrait.serialize_schema and
:meth:pyarrow.substrait.deserialize_schema functions.
.. code-block:: python
>>> import pyarrow as pa
>>> import pyarrow.substrait as pa_substrait
>>> arrow_schema = pa.schema([
... pa.field("x", pa.int32()),
... pa.field("y", pa.string())
... ])
>>> substrait_schema = pa_substrait.serialize_schema(arrow_schema)
The schema marshalled as a Substrait NamedStruct is directly
available as substrait_schema.schema:
.. code-block:: python
>>> print(bytes(substrait_schema.schema))
b'\n\x01x\n\x01y\x12\x0c\n\x04*\x02\x10\x01\n\x04b\x02\x10\x01'
In case arrow custom types were used, the schema will require
extensions for those types to be actually usable, for this reason
the schema is also available as an Extended Expression_ including
all the extensions types:
.. code-block:: python
>>> print(bytes(substrait_schema.expression))
b'"\x14\n\x01x\n\x01y\x12\x0c\n\x04*\x02\x10\x01\n\x04b\x02\x10\x01:\x19\x10,*\x15Acero ...'
If Substrait Python is installed, the schema can also be converted to
a substrait-python object:
.. code-block:: python
>>> print(substrait_schema.to_pysubstrait()) # doctest: +SKIP
version {
minor_number: 44
producer: "Acero ..."
}
base_schema {
names: "x"
names: "y"
struct {
types {
i32 {
nullability: NULLABILITY_NULLABLE
}
}
types {
string {
nullability: NULLABILITY_NULLABLE
}
}
}
}
Arrow compute expressions can be encoded and decoded using the
:meth:pyarrow.substrait.serialize_expressions and
:meth:pyarrow.substrait.deserialize_expressions functions.
.. code-block:: python
>>> import pyarrow.compute as pc
>>> arrow_schema = pa.schema([
... pa.field("x", pa.int32()),
... pa.field("y", pa.int32())
... ])
>>> substrait_expr = pa_substrait.serialize_expressions(
... exprs=[pc.field("x") + pc.field("y")],
... names=["total"],
... schema=arrow_schema
... )
The result of encoding to substrait an expression will be the
protobuf ExtendedExpression message data itself:
.. code-block:: python
>>> print(bytes(substrait_expr))
b'\nZ\x12Xhttps://github.com/substrait-io/substrait/blob/main/extensions/functions_arithmetic.yaml\x12\x07\x1a\x05\x1a\x03add\x1a>\n5\x1a3\x1a\x04*\x02\x10\x01"\n\x1a\x08\x12\x06\n\x02\x12\x00"\x00"\x0c\x1a\n\x12\x08\n\x04\x12\x02\x08\x01"\x00*\x11\n\x08overflow\x12\x05ERROR\x1a\x05total"\x14\n\x01x\n\x01y\x12\x0c\n\x04*\x02\x10\x01\n\x04*\x02\x10\x01:\x19\x10,*\x15Acero ...'
So in case a Substrait Python object is required, the expression
has to be decoded from substrait-python itself:
.. code-block:: python
>>> import substrait # doctest: +SKIP
>>> pysubstrait_expr = substrait.proto.ExtendedExpression.FromString(substrait_expr) # doctest: +SKIP
>>> print(pysubstrait_expr) # doctest: +SKIP
version {
minor_number: 44
producer: "Acero 17.0.0"
}
extension_uris {
uri: "https://github.com/substrait-io/substrait/blob/main/extensions/functions_arithmetic.yaml"
}
extensions {
extension_function {
name: "add"
}
}
referred_expr {
expression {
scalar_function {
arguments {
value {
selection {
direct_reference {
struct_field {
}
}
root_reference {
}
}
}
}
arguments {
value {
selection {
direct_reference {
struct_field {
field: 1
}
}
root_reference {
}
}
}
}
options {
name: "overflow"
preference: "ERROR"
}
output_type {
i32 {
nullability: NULLABILITY_NULLABLE
}
}
}
}
output_names: "total"
}
base_schema {
names: "x"
names: "y"
struct {
types {
i32 {
nullability: NULLABILITY_NULLABLE
}
}
types {
i32 {
nullability: NULLABILITY_NULLABLE
}
}
}
}
Dataset supports executing queries using Substrait's Extended Expression_,
the expressions can be passed to the dataset scanner in the form of
:class:pyarrow.substrait.BoundExpressions
.. code-block:: python
>>> import pyarrow.dataset as ds # doctest: +SKIP
>>> import pyarrow.substrait as pa_substrait # doctest: +SKIP
>>> # Use substrait-python to create the queries
>>> from substrait import proto # doctest: +SKIP
>>> dataset = ds.dataset("./data/index-0.parquet") # doctest: +SKIP
>>> substrait_schema = pa_substrait.serialize_schema(dataset.schema).to_pysubstrait() # doctest: +SKIP
>>> # SELECT project_name FROM dataset WHERE project_name = 'pyarrow'
>>> projection = proto.ExtendedExpression(referred_expr=[ # doctest: +SKIP
... {"expression": {"selection": {"direct_reference": {"struct_field": {"field": 0}}}},
... "output_names": ["project_name"]}
... ])
>>> projection.MergeFrom(substrait_schema) # doctest: +SKIP
>>> filtering = proto.ExtendedExpression( # doctest: +SKIP
... extension_uris=[{"extension_uri_anchor": 99, "uri": "/functions_comparison.yaml"}],
... extensions=[{"extension_function": {"extension_uri_reference": 99, "function_anchor": 199, "name": "equal:any1_any1"}}],
... referred_expr=[
... {"expression": {"scalar_function": {"function_reference": 199, "arguments": [
... {"value": {"selection": {"direct_reference": {"struct_field": {"field": 0}}}}},
... {"value": {"literal": {"string": "pyarrow"}}}
... ], "output_type": {"bool": {"nullability": False}}}}}
... ]
... )
>>> filtering.MergeFrom(substrait_schema) # doctest: +SKIP
>>> results = dataset.scanner( # doctest: +SKIP
... columns=pa.substrait.BoundExpressions.from_substrait(projection),
... filter=pa.substrait.BoundExpressions.from_substrait(filtering)
... ).head(5)
.. code-block:: text
project_name
0 pyarrow
1 pyarrow
2 pyarrow
3 pyarrow
4 pyarrow
.. _Substrait: https://substrait.io/
.. _Substrait Python: https://github.com/substrait-io/substrait-python
.. _Acero: https://arrow.apache.org/docs/cpp/acero.html
.. _Extended Expression: https://github.com/substrait-io/substrait/blob/main/site/docs/expressions/extended_expression.md